Difference between revisions of "Julia Udell"

From The Circuits and Biology Lab at UMN
Jump to navigationJump to search
(Created page with "200px == About == I am a PhD Student in [https://r.umn.edu/academics-research/graduate-programs/bicb Bioinformatics and Computational Biology] at...")
 
 
(One intermediate revision by the same user not shown)
Line 7: Line 7:


My research sits in the intersection of genomics, immunology, and informatics. I am supported by the [https://www.cibmtr.org/Pages/index.aspx Center for International Blood & Marrow Transplant Research], where I work as a Graduate Researcher in the Bioinformatics Research department and do research on graft-versus-host disease and computer modeling of immune reactivity. My secondary research site is the Biomarker Discovery Group at the [http://mayoresearch.mayo.edu/center-for-individualized-medicine/ Center for Individualized Medicine at the Mayo Clinic in Rochester], where I predict and validate immune targets in cancer using gene sequencing of tumor tissue.
My research sits in the intersection of genomics, immunology, and informatics. I am supported by the [https://www.cibmtr.org/Pages/index.aspx Center for International Blood & Marrow Transplant Research], where I work as a Graduate Researcher in the Bioinformatics Research department and do research on graft-versus-host disease and computer modeling of immune reactivity. My secondary research site is the Biomarker Discovery Group at the [http://mayoresearch.mayo.edu/center-for-individualized-medicine/ Center for Individualized Medicine at the Mayo Clinic in Rochester], where I predict and validate immune targets in cancer using gene sequencing of tumor tissue.
= Papers =
{|
|
{| style="background:#F0E68C"
|- valign="top"
| width="100" | '''title''':
| width="500" | [[Media:Evasive_Spike_Variants_Elucidate_the_Preservation_of_T_Cell_Immune_Response_to_the_SARS-CoV-2_Omicron_Variant.pdf|Evasive Spike Variants Elucidate the Preservation of T cell Immune Response to the SARS-CoV-2 Omicron Variant]]
|- valign="top"
| '''authors''':
| [[Arnav Solanki]], [[Marc Riedel]], [https://orion.math.iastate.edu/cornette/ James Cornette], [[Julia Udell]], and [https://www.mayo.edu/research/faculty/vasmatzis-george-ph-d/bio-00027811 George Vasmatzis]
|- valign="top"
| '''appeared in''':
| [https://ieeexplore.ieee.org/document/10457533 IEEE/ACM Trans. on Computational Biology and Bioinformatics], pp. 1–11, March, 2024
|}
| width="70" align="center" |
<span class="plainlinks">
[https://mriedel.ece.umn.edu/wiki/images/1/12/Evasive_Spike_Variants_Elucidate_the_Preservation_of_T_Cell_Immune_Response_to_the_SARS-CoV-2_Omicron_Variant.pdf http://mriedel.ece.umn.edu/wiki/images/0/04/Pdf.jpg]</span>
<br>
[[Media:Evasive_Spike_Variants_Elucidate_the_Preservation_of_T_Cell_Immune_Response_to_the_SARS-CoV-2_Omicron_Variant.pdf | Paper]]
|}
{|
|
{| style="background:#F0E68C"
|- valign="top"
| width="100" | '''title''':
| width="500" | [[Media:Solanki Riedel Cornette Udell Vasmatzis Hydrophobicity Identifies False Positives and False Negatives in Peptide-MHC Binding.pdf|Hydrophobicity Identifies False Positives and False Negatives in Peptide-MHC Binding]]
|- valign="top"
| '''authors''':
| [[Arnav Solanki]], [[Marc Riedel]], [https://orion.math.iastate.edu/cornette/ James Cornette], [[Julia Udell]], and [https://www.mayo.edu/research/faculty/vasmatzis-george-ph-d/bio-00027811 George Vasmatzis]
|- valign="top"
| '''appeared in''':
| [https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2022.1034810/full Frontiers in Oncology], Vol. 12, No. 1034810, 2022
|- valign="top"
| '''presented&nbsp;at''':
| [http://ismco.net/ 3rd International Symposium on Mathematical and Computational Oncology], 2021
|}
| align="center" width="70" |
<span class="plainlinks">
[https://mriedel.ece.umn.edu/wiki/images/1/1b/Solanki_Riedel_Cornette_Udell_Vasmatzis_Hydrophobicity_Identifies_False_Positives_and_False_Negatives_in_Peptide-MHC_Binding.pdf http://mriedel.ece.umn.edu/wiki/images/0/04/Pdf.jpg]</span>
<br>
[[Media:Solanki_Riedel_Cornette_Udell_Vasmatzis_Hydrophobicity_Identifies_False_Positives_and_False_Negatives_in_Peptide-MHC_Binding.pdf | Paper]]
| align="center" width="70" |
<span class="plainlinks">[http://mriedel.ece.umn.edu/wiki/images/8/8b/ISMCO2021.pdf http://mriedel.ece.umn.edu/wiki/images/3/36/Ppt.jpg]</span>
<br>[http://mriedel.ece.umn.edu/wiki/images/8/8b/ISMCO2021.pdf Slides]
|}


== Contact ==
== Contact ==


Email: udell008@umn.edu
Email: udell008@umn.edu

Latest revision as of 04:12, 10 April 2024

Judell long.png


About

I am a PhD Student in Bioinformatics and Computational Biology at the University of Minnesota, advised by Prof. Marc Riedel.

My research sits in the intersection of genomics, immunology, and informatics. I am supported by the Center for International Blood & Marrow Transplant Research, where I work as a Graduate Researcher in the Bioinformatics Research department and do research on graft-versus-host disease and computer modeling of immune reactivity. My secondary research site is the Biomarker Discovery Group at the Center for Individualized Medicine at the Mayo Clinic in Rochester, where I predict and validate immune targets in cancer using gene sequencing of tumor tissue.

Papers

title: Evasive Spike Variants Elucidate the Preservation of T cell Immune Response to the SARS-CoV-2 Omicron Variant
authors: Arnav Solanki, Marc Riedel, James Cornette, Julia Udell, and George Vasmatzis
appeared in: IEEE/ACM Trans. on Computational Biology and Bioinformatics, pp. 1–11, March, 2024

Pdf.jpg
Paper

title: Hydrophobicity Identifies False Positives and False Negatives in Peptide-MHC Binding
authors: Arnav Solanki, Marc Riedel, James Cornette, Julia Udell, and George Vasmatzis
appeared in: Frontiers in Oncology, Vol. 12, No. 1034810, 2022
presented at: 3rd International Symposium on Mathematical and Computational Oncology, 2021

Pdf.jpg
Paper

Ppt.jpg
Slides

Contact

Email: udell008@umn.edu

Retrieved from "http://mriedel.ece.umn.edu/wiki/index.php?title=Julia_Udell&oldid=333483"